NFDI - German National Research Data Infrastructure
In the German National Research Data Infrastructure (NFDI), valuable data from science and research are systematically accessed, networked and made usable in a sustainable and qualitative manner for the entire German science system. Up to now, they have mostly been available on a decentralised, project-related or temporary basis. The NFDI aims to create a permanent digital repository of knowledge as an indispensable prerequisite for new research questions, findings and innovations. Relevant data should be made available according to the FAIR principles (Findable, Accessible, Interoperable and Reusable). NFDI consortia, associations of various institutions within a research field, work together in an interdisciplinary manner to implement the goal. The non-profit Association Nationale Forschungsdateninfrastruktur (NFDI) e.V., based in Karlsruhe, was founded to coordinate the activities for establishing a national research data infrastructure. Together, the Association and the NFDI consortia are shaping the future of research data management in Germany. In addition, the NFDI will also be linked to international initiatives such as the European Open Science Cloud (EOSC) and participate in its development.
Web page: https://www.nfdi.de/?lang=en
Funding details: Related items
This project serves as a container for all clinical trial of University of Leipzig (IMISE / ZKS) within the framework of the NFDI4Health
Programme: NFDI - German National Research Data Infrastructure
Public web page: Not specified
TA3 focusses on the services, service enabling tools, and software that NFDI4Health will provide to the user community. Services and tools that will be developed or advanced during the project will be published as open source software.
This project serves as a container for all COVID-19 related assets, developed at the University of Leipzig and its partners.
Programme: NFDI - German National Research Data Infrastructure
Public web page: https://www.nfdi4health.de/task-force-covid-19
Start date: 20th May 2020
NFDI4Health - the National Research Data Infrastructure for Personal Health Data - deals with data generated in clinical trials, epidemiological and public health studies. The collection and analysis of these data on health and disease status and important factors influencing it are an essential component for the development of new therapies, comprehensive care approaches and preventive measures in a modern health care system. Although these data already meet high content quality standards, they ...
Programme: NFDI - German National Research Data Infrastructure
Public web page: https://www.nfdi4health.de/en
A collection of Bulletins of the Institute for Medical Informatics, Statistics and Epidemiology (IMISE) about the COVID-19 pandemic in Leipzig and Saxony. This work was funded in the framework of the project SaxoCOV (Saxonian COVID-19 Research Consortium, SaxoCOV was financed by the Free State of Saxony).”
Submitter: René Hänsel
Investigation: Covid-19
Resources: Entwicklung der COVID-19 Epidemie in Sachsen und Deutschland
Study type: Not specified
Submitter: René Hänsel
Investigation: Covid-19
Resources: Covid-19 Data Sources Germany, Covid-19 Data Sources worldwide
Study type: Not specified
A collection of Bulletins of the Institute for Medical Informatics, Statistics and Epidemiology (IMISE) about the COVID-19 pandemic in Leipzig and Saxony. This work was funded in the framework of the project SaxoCOV (Saxonian COVID-19 Research Consortium, SaxoCOV was financed by the Free State of Saxony).”
Submitter: René Hänsel
Resource type: Experimental Assay Type
Technology type: Technology Type
Investigation: Covid-19
Submitter: René Hänsel
Resource type: Experimental Assay Type
Technology type: Technology Type
Investigation: Covid-19
Abstract (Expand)
Authors: Y. Kheifetz, H. Kirsten, M. Scholz
Abstract (Expand)
Authors: H. Loeffler-Wirth, M. Schmidt, H. Binder
Risklayer Explorer is a collaboration between Risklayer GmbH and the Karlsruhe Institute of Technology's Center for Disaster Risk Management and Risk Reduction Technology (CEDM).
Creator: René Hänsel
Submitter: René Hänsel
Data file type: Geographical Data
Human Diseases: COVID-19
External Link
View contentCreator: European Centre for Disease Prevention and Control
Submitter: René Hänsel
Data file type: Geographical Data
Human Diseases: COVID-19
Creator: Johns Hopkins University
Submitter: René Hänsel
Data file type: Geographical Data
Human Diseases: COVID-19
Creator: Robert Koch Institute
Submitter: René Hänsel
Data file type: Geographical Data
Human Diseases: COVID-19
Feature service with the current Covid-19 infections per 100,000 inhabitants on the German federal states. The service is updated daily with the current case numbers of the Robert Koch Institute.
Data source: Robert Koch Institute Terms of Use: Robert Koch Institute; German Federal Agency for Cartography and Geodesy Source note: Robert Koch-Institute (RKI), dl-en/by-2-0 Disclaimer: "The content made available on the Internet pages of the Robert Koch-Institute is intended solely for the general ...
Creator: Robert Koch Institute
Submitter: René Hänsel
Data file type: Not specified
Human Diseases: COVID-19
Feature service with the current Covid-19 infections per 100,000 inhabitants on the German districts. The service is updated daily with the current case numbers of the Robert Koch Institute.
Data source: Robert Koch Institute Terms of Use: Robert Koch Institute; German Federal Agency for Cartography and Geodesy Source note: Robert Koch-Institute (RKI), dl-en/by-2-0 Disclaimer: "The content made available on the Internet pages of the Robert Koch-Institute is intended solely for the general information ...
Creator: Robert Koch Institute
Submitter: René Hänsel
Data file type: Not specified
Human Diseases: COVID-19
Age-stratified numbers of COVID-19 testpositives and deaths
This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, René Hänsel
Submitter: René Hänsel
Model type: Graphical model
Model format: R package
Environment: Shiny
A principled approach to parametrize SIR-type epidemiologic models of different complexities by embedding the model structure as a hidden layer into a general Input-Output Non-Linear Dynamical System (IO-NLDS). Non-explicitly modelled impacts on the system are imposed as inputs of the system. Observable data are coupled to hidden states of the model by appropriate data models considering possible biases of the data. We estimate model parameters including their time-dependence by a Bayesian knowledge ...
Creators: Markus Scholz, Holger Kirsten, Yuri Kheifetz
Submitter: Holger Kirsten
Model type: Ordinary differential equations (ODE)
Model format: R package
Environment: Not specified
The Covid‐19 viewer provides an intuitive tool to monitor the development of the pandemic in 188 countries using simple plots. The tool is interactive and enables the user to select different plots for single countries, groups or all of them. It visualizes descriptive features such as slopes or flattening behaviour of epidemic numbers and of their increments to allow a qualitative justification of the current state of the pandemic, e.g. whether it is growing exponentially, stopped due to counter ...
Creators: Hans Binder, Henry Löffler-Wirth
Submitter: Henry Löffler-Wirth
Model type: Not specified
Model format: R package
Environment: Shiny
Der Local Data Hub (LDH) dient der Präsentation und dem Austausch Ihrer Projekte, Studien, Publikationen, (bio-)medizinischen Daten, Modelle und Softwaretools aus dem Bereich der Gesundheitsforschung und basiert auf den FAIR-Prinzipien (Findable, Accessible,Interoperable, Reusable). Zielgruppen sind Forscher:innen aus den Fachbereichen (Bio)Medizin, Epidemiologie, Biostatistik, Modellierung oder Bio- und Medizininformatik. Der LDH ist eine einfach zu verwaltende, webbasierte Softwarelösung, die ...
Creator: Frank A. Meineke
Submitter: Frank A. Meineke
DownloadSummary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Torsten Thalheim, Markus Scholz, Markus Löffler
Submitter: René Hänsel
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Löffler, Markus Scholz, Torsten Thalheim, Radosław dzikowski, Yuri Kheifetz, Tyll Krüger, Tomasz Ożański, Marcin Bodych, Maciej Filiński
Submitter: René Hänsel
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Scholz, Markus Löffler, Peter Ahnert, Anne Dietrich, Dirk Hasenclever, Matthias Horn, Yuri Kheifetz, Tyll Krüger, Sibylle Schirm
Submitter: Christoph Beger
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Löffler, Markus Scholz, Peter Ahnert, Matthias Horn, Yuri Kheifetz, Kolja Nenoff, Sibylle Schirm
Submitter: Christoph Beger
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Löffler, Markus Scholz, Peter Ahnert, Matthias Horn, Yuri Kheifetz, Kolja Nenoff, Sibylle Schirm
Submitter: Christoph Beger
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Scholz, Markus Löffler, Peter Ahnert, Matthias Horn, Yuri Kheifetz, Kolja Nenoff, Sibylle Schirm
Submitter: Christoph Beger
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Scholz, Markus Löffler, Peter Ahnert, Matthias Horn, Yuri Kheifetz, Sibylle Schirm
Submitter: Christoph Beger
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Scholz, Markus Löffler, Peter Ahnert, Matthias Horn, Yuri Kheifetz, Sibylle Schirm
Submitter: Christoph Beger
Summary of the current COVID-19 pandemic development in Leipzig and Saxony. This work was done as part of the NFDI4Health Task Force COVID-19 (nfdi4health.de). We gratefully acknowledge the financial support of the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project Number 451265285.
Creators: Holger Kirsten, Markus Scholz, Markus Löffler, Peter Ahnert, Matthias Horn, Yuri Kheifetz, Sibylle Schirm
Submitter: Christoph Beger
Projects: LHA - Leipzig Health Atlas, Onto-Med Research Group, SMITH - Smart Medical Information Technology for Healthcare, Task Force COVID-19 Leipzig, NFDI4Health, LIFE Child, LIFE - Leipzig Research Center for Civilization Diseases, Project Test Demonstrator
Institutions: Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Universitätsklinikum Leipzig, AöR, invalid
https://orcid.org/0000-0002-1166-0368
Profile image source: Swen Reichhold
Projects: Clinical Trials Leipzig, NFDI4Health, STOP-NUC, BASALIT
Institutions: Zentrum für Klinische Studien Leipzig (ZKS Leipzig), Universität Leipzig
Projects: LHA - Leipzig Health Atlas, LIFE Adult, LIFE - Leipzig Research Center for Civilization Diseases, LIFE HNC - Head and Neck Cancer Group, LIFE Heart, MMML - Molecular mechanisms in malignant lymphoma, GLA - German Lymphoma Alliance, MMML Demonstrators - Molecular Mechanisms in Malignant Lymphomas - Demonstrators of Personalized Medicine, HaematoOpt - Individualized model-based managing of the next-cycle thrombopenia of CHOEP/CHOP treated patients based on platelets dynamics during the previous cycles, e:Med, GC-HBOC - German Consortium for Hereditary Breast and Ovarian Cancer, GC-HNPCC - German Consortium for Hereditary Non-Polyposis Colorectal Cancer, MMML-MYC-SYS, NLP4CR - Natural Language Processing for Clinical Research, Genetical Statistics and Systems Biology, SepNet - German Competence Network Sepsis, LIFE Child, HNPCC-Sys - Genomic and transcriptomic heterogeneity of colorectal tumours arising in Lynch syndrome, GGN - German Glioma Network, CAPSys - Footprints of Sepsis Framed Within Community Acquired Pneumonia in the Blood Transcriptome, CapSys - Systems Medicine of Community Acquired Pneumonia, ProstataCA, HaematoSys - Systems biology of haematopoiesis and haematopoietic neoplasia, SMITH - Smart Medical Information Technology for Healthcare, Task Force COVID-19 Leipzig, NFDI4Health, POLAR - Polypharmacy, Drug Interactions, Risks, Management of health information systems, LivSys Transfer - Transfer of the LivSys in vitro system for hepatotoxicity into application, Project Test Demonstrator, Fundus photography as tool for analysis of eyes of subjects with diabetes, Clinical Trials Leipzig, NFDI4Health - TA3 Services, STOP-NUC, SCALE-TORT, EarlyAMDRate
Institutions: Institute for Medical Informatics, Statistics and Epidemiology (IMISE)
https://orcid.org/0000-0001-8344-0658
Projects: LHA - Leipzig Health Atlas, LIFE Adult, LIFE - Leipzig Research Center for Civilization Diseases, LIFE HNC - Head and Neck Cancer Group, MMML - Molecular mechanisms in malignant lymphoma, GLA - German Lymphoma Alliance, MMML Demonstrators - Molecular Mechanisms in Malignant Lymphomas - Demonstrators of Personalized Medicine, MMML-MYC-SYS, Genetical Statistics and Systems Biology, SepNet - German Competence Network Sepsis, HaematoSys - Systems biology of haematopoiesis and haematopoietic neoplasia, e:Med, SMITH - Smart Medical Information Technology for Healthcare, Task Force COVID-19 Leipzig, NFDI4Health, POLAR - Polypharmacy, Drug Interactions, Risks
Institutions: Institute for Medical Informatics, Statistics and Epidemiology (IMISE), University of Leipzig
Prof. Dr. Markus Löffler Universität Leipzig Institut für Medizinische Informatik, Statistik und Epidemiologie Härtelstraße 16-18 04107 Leipzig
Projects: Leipzig Melanoma Studies, GLA - German Lymphoma Alliance, MMML-MYC-SYS, GGN - German Glioma Network, LIFE Adult, LIFE - Leipzig Research Center for Civilization Diseases, Task Force COVID-19 Leipzig, NFDI4Health, LHA - Leipzig Health Atlas, Think different, imSAVAR - Immune safety avatar: nonclinical mimicking of the immune system effects of immunomodulatory therapies, oBIG - omics Bioinformatics for Health, Vine Bioinformatics - grape genomics for Innovative viticulture
Institutions: University of Leipzig, Interdisciplinary Center for Bioinformatics (IZBI)
https://orcid.org/0000-0001-8239-440X
Projects: LHA - Leipzig Health Atlas, SMITH - Smart Medical Information Technology for Healthcare, POLAR - Polypharmacy, Drug Interactions, Risks, Management of health information systems, Project Test Demonstrator, NFDI4Health - TA3 Services, NFDI4Health, Methodical Use Case PheP, STOP-NUC, BASALIT
Institutions: Institute for Medical Informatics, Statistics and Epidemiology (IMISE)
https://orcid.org/0000-0002-9256-7543
Projects: LIFE Heart, LIFE - Leipzig Research Center for Civilization Diseases, HaematoOpt - Individualized model-based managing of the next-cycle thrombopenia of CHOEP/CHOP treated patients based on platelets dynamics during the previous cycles, e:Med, Genetical Statistics and Systems Biology, Task Force COVID-19 Leipzig, NFDI4Health
Institutions: Institute for Medical Informatics, Statistics and Epidemiology (IMISE)
Markus Scholz Scientific Speaker Institution Institut für Medizinische Informatik, Statistik und Epidemiologie Universität Leipzig Härtelstraße 16-18 04107 Leipzig
Taxonomy URI: http://purl.obolibrary.org/obo/DOID_0080600
Synonyms: 2019-nCoV infection, 2019 Novel Coronavirus (2019-nCoV), Wuhan seafood market pneumonia virus infection, Wuhan coronavirus infection
Definitions: A Coronavirus infection that is characterized by fever, cough and shortness of breath and that has_material_basis_in SARS-CoV-2.
