scRNA-Seq across species for pulmonologists

Motivation:

To demonstrate current procedures and tools to create, compare and qualitatively assess the single-cell transcriptomes of the lung in three different species; human (Homo sapiens), hamster (Mesocricetus auratus), and mice (Mus musculus).

In our manuscript, we describe current procedures, tools, and results to create, compare and qualitatively assess the single-cell transcriptomes of the lung in three different species; human (Homo sapiens), hamster (Mesocricetus auratus), and mice (Mus musculus). We make the analysis reproducible by publishing the R-based workflow on GitHub pulmonologists_interspecies_scRNA. Here in the LHA, we provide the required scRNA-Seq input data as Seurat RDS file, as well as resulting processed transcriptome data, also as Seurat RDS file.

LHA ID: 88KGM6EM2F-3

OMICS Investigations

Projects: Genetical Statistics and Systems Biology, LIFE Adult, LIFE Heart

Study position:

Study type: Cell study

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Created: 9th Sep 2021 at 09:10

Last updated: 10th Sep 2021 at 10:58

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