scRNA-Seq expression-data as RDS Seurat file
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For our R-based workflow on GitHub pulmonologists_interspecies_scRNA, we here provide the processed resulting annotated integrated Seurat file.

References for original datasets :

Human Charité: Hocke A, Hönzke K, Obermayer B, Baumgardt M, Wyler E, Hippenstiel S, Mache C. Charité Berlin /Berlin Institute of Health. GEO accessions GSM5958267, GSM5958272, GSM5958283, GSM5958285

Human Travaglini et al.: published at https://www.synapse.org by Travaglini et al. (https://doi.org/10.1038/s41586-020-2922-4 Titel anhand dieser DOI in Citavi-Projekt übernehmen)

Monkey: published at https://www.ncbi.nlm.nih.gov/geo by Speranza et al. (https://doi.org/10.1126/scitranslmed.abe8146 Titel anhand dieser DOI in Citavi-Projekt übernehmen)

Hamster: Charité Berlin, see: https://doi.org/10.1038/s41467-021-25030-7 Titel anhand dieser DOI in Citavi-Projekt übernehmen

Mouse: Pennitz P, Witzenrath, M, Nouailles G, Berlin Charité.

Rat and Pig: published at https://www.ncbi.nlm.nih.gov/geo by Raredon et al. (https://doi.org/10.1126/sciadv.aaw3851 Titel anhand dieser DOI in Citavi-Projekt übernehmen) .

Annotation: Ensembl BioMart

LHA ID: 8EMEEK58FH-3

Filename: s603_2_seurat_lunge_merged_21-12-11.RDS  Download

Format: Binary file

Size: 3.57 GB

Data file type: Transcriptomic Data

Human Diseases: No Human Disease specified




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Created: 26th Sep 2022 at 09:59

Last updated: 26th Sep 2022 at 10:01

Last used: 28th Nov 2022 at 21:27

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Version 1 Created 26th Sep 2022 at 09:59 by Holger Kirsten

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