Ontology-based Phenotype Knowledge Model
In this study we used the Core Ontology of Phenotypes as general phenotypic model to represent phenotype knowledge. The phenotypes are modelled in so called Phenotype Specification Ontologies.
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Franz Matthies, Ralph Schäfermeier
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Created: 23rd Feb 2022 at 12:51
Last updated: 29th Mar 2022 at 17:02
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The Onto-Med Research Group conducts basic research in formal ontology, designs formal tools for constructing and managing ontologies and develops top level ontologies as well as domain and core ontologies for medicine, bio-medicine and biology, but also for other fields. The Onto-Med group uses an interdisciplinary approach, combining methods from logic, computer science, philosophy and cognitive linguistics. The Onto-Med group considers Formal Ontology as an evolving science which is concerned ...
Programme: This Project is not associated with a Programme
Public web page: http://www.onto-med.de
Start date: 1st Jan 2002
The aim of this investigation is to develop a methodology to model and express phenotype classes. These models can be used to generate queries to search for individuals (patients or study participants) with specific phenotypes.
Submitter: Christoph Beger
Studies: Ontology-based Phenotype Knowledge Model
Resources: Example Phenotype Specification Ontology for Inclusion Criteria Hyperten...
Example study for people with hypertension or obesity as inclusion criteria. This ontology uses the Core Ontology of Phenotypes as a general phenotypic model.
Submitter: Christoph Beger
Biological problem addressed: Model Analysis Type
Investigation: Phenotype Knowledge Model
Creators: Alexandr Uciteli, Christoph Beger, Toralf Kirsten, Heinrich Herre, Franz Matthies, Ralph Schäfermeier
Submitter: Christoph Beger
Data file type: Not specified
Human Diseases: obesity, hypertension
Projects: LHA - Leipzig Health Atlas, Onto-Med Research Group, SMITH - Smart Medical Information Technology for Healthcare, Task Force COVID-19 Leipzig, NFDI4Health, LIFE Child, LIFE - Leipzig Research Center for Civilization Diseases, Project Test Demonstrator
Institutions: Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Universitätsklinikum Leipzig, AöR, invalid
https://orcid.org/0000-0002-1166-0368
Profile image source: Swen Reichhold
Projects: Onto-Med Research Group
Institutions: Institute for Medical Informatics, Statistics and Epidemiology (IMISE)
