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| Sample name | title | source name | organism | idat file | characteristics: ID | characteristics: GENDER | characteristics: AGE | characteristics: SMOKING | characteristics: PACKYEARS | characteristics: ALCOHOL | characteristics: TUMOR_TYPE | characteristics: TUMOR_SITE | characteristics: UICC_STAGE | characteristics: T_CATEGORY | characteristics: N_CATEGORY | characteristics: DISTANT_METASTASIS | characteristics: TREATMENT | characteristics: HPV_DNA | characteristics: HPV16_DNA_RNA | characteristics: OS | characteristics: OS_EVENT | characteristics: PFS | characteristics: PFS_EVENT | characteristics: CONSENSUS_CLUSTER | characteristics: AKT1_MUTATION | characteristics: APC_MUTATION | characteristics: ATM_MUTATION | characteristics: CDH1_MUTATION | characteristics: CDKN2A_MUTATION | characteristics: CSF1R_MUTATION | characteristics: EGFR_MUTATION | characteristics: ERBB2_MUTATION | characteristics: ERBB4_MUTATION | characteristics: FBXW7_MUTATION | characteristics: FGFR2_MUTATION | characteristics: FGFR3_MUTATION | characteristics: FLT3_MUTATION | characteristics: GNA11_MUTATION | characteristics: HRAS_MUTATION | characteristics: IDH1_MUTATION | characteristics: JAK3_MUTATION | characteristics: KIT_MUTATION | characteristics: NOTCH1_MUTATION | characteristics: NRAS_MUTATION | characteristics: PIK3CA_MUTATION | characteristics: PTEN_MUTATION | characteristics: RB1_MUTATION | characteristics: RET_MUTATION | characteristics: SMAD4_MUTATION | characteristics: SMO_MUTATION | characteristics: SRC_MUTATION | characteristics: STK11_MUTATION | characteristics: TP53_MUTATION | characteristics: VHL_MUTATION | molecule | label | description | platform |
| GW_001 | GW_001 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_001 Head and neck squamous cell carcinoma | Homo sapiens | GW_001 | F | 59.2772073921971 | No | 0 | 1 to 30 | Primary | Oropharynx | IVA | 2 | 2c | 0 | multi | HPV16 | DNA+RNA+ | 1100 | FALSE | 1100 | FALSE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_003 | GW_003 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_003 Head and neck squamous cell carcinoma | Homo sapiens | GW_003 | M | 76.2135523613963 | No | 0 | >60 | Primary | Oropharynx | IVA | 2 | 2b | 0 | mono | HPV16 | DNA+RNA+ | 1835 | FALSE | 1771 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_004 | GW_004 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_004 Head and neck squamous cell carcinoma | Homo sapiens | GW_004 | M | 64.3915126625599 | Yes | 14 | 31 to 60 | Primary | Oropharynx | IVA | 2 | 2c | 0 | mono | HPV16 | NA | 2393 | TRUE | 2393 | TRUE | Atypical IR 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_005 | GW_005 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_005 Head and neck squamous cell carcinoma | Homo sapiens | GW_005 | M | 66.9322381930185 | No | 0 | 1 to 30 | Primary | Oropharynx | IVA | 2 | 2a | 0 | multi | HPV16 | DNA+RNA+ | 1212 | FALSE | 1212 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_006 | GW_006 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_006 Head and neck squamous cell carcinoma | Homo sapiens | GW_006 | F | 79.0718685831622 | Yes | 2 | 1 to 30 | Primary | Oropharynx | IVB | 4b | 2b | 0 | multi | HPV16 | DNA+RNA+ | 987 | TRUE | 987 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_007 | GW_007 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_007 Head and neck squamous cell carcinoma | Homo sapiens | GW_007 | F | 46.1327857631759 | Yes | 32 | no | Primary | Oropharynx | IVA | 2 | 2c | 0 | multi | Other HPV | NA | 1939 | TRUE | 1939 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_008 | GW_008 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_008 Head and neck squamous cell carcinoma | Homo sapiens | GW_008 | M | 75.2060232717317 | Yes | 45 | 1 to 30 | Primary | Oropharynx | III | 2 | 1 | 0 | multi | Other HPV | NA | 1329 | FALSE | 1329 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_009 | GW_009 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_009 Head and neck squamous cell carcinoma | Homo sapiens | GW_009 | M | 56.8980150581793 | No | 0 | 1 to 30 | Primary | Oropharynx | III | 2 | 1 | 0 | multi | Other HPV | NA | 941 | FALSE | 941 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_010 | GW_010 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_010 Head and neck squamous cell carcinoma | Homo sapiens | GW_010 | F | 69.0376454483231 | Yes | 30 | no | Primary | Cavum Oris | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 1234 | FALSE | 1234 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_011 | GW_011 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_011 Head and neck squamous cell carcinoma | Homo sapiens | GW_011 | M | 55.8932238193018 | Yes | 30 | >60 | Primary | Cavum Oris | II | 2 | 0 | 0 | multi | Negative | DNA- | 1024 | FALSE | 1024 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_012 | GW_012 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_012 Head and neck squamous cell carcinoma | Homo sapiens | GW_012 | M | 50.4777549623546 | Yes | 30 | no | Primary | Oropharynx | II | 2 | 0 | 0 | multi | Negative | DNA- | 884 | FALSE | 884 | FALSE | Mesenchymal 3 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_013 | GW_013 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_013 Head and neck squamous cell carcinoma | Homo sapiens | GW_013 | M | 48.8733744010951 | Yes | 40 | 1 to 30 | Primary | Cavum Oris | II | 2 | 0 | 0 | multi | Negative | DNA- | 1022 | FALSE | 1022 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_014 | GW_014 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_014 Head and neck squamous cell carcinoma | Homo sapiens | GW_014 | M | 58.7488021902806 | Yes | 40 | 1 to 30 | Primary | Oropharynx | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 1073 | TRUE | 1073 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_015 | GW_015 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_015 Head and neck squamous cell carcinoma | Homo sapiens | GW_015 | M | 64.3148528405202 | No | 0 | 1 to 30 | Primary | Cavum Oris | IVA | 4a | 0 | 0 | multi | HPV16 | DNA+RNA- | 1289 | FALSE | 1289 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_016 | GW_016 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_016 Head and neck squamous cell carcinoma | Homo sapiens | GW_016 | F | 71.5099247091034 | Yes | 50 | 31 to 60 | Primary | Cavum Oris | III | 3 | 0 | 0 | multi | Negative | DNA- | 1066 | TRUE | 1066 | TRUE | Mesenchymal 3 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_017 | GW_017 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_017 Head and neck squamous cell carcinoma | Homo sapiens | GW_017 | F | 63.0746064339493 | Yes | 70 | >60 | Primary | Oropharynx | IVA | 4a | 1 | 0 | multi | Negative | DNA- | 1038 | FALSE | 1038 | FALSE | Classical 2 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_018 | GW_018 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_018 Head and neck squamous cell carcinoma | Homo sapiens | GW_018 | M | 54.2669404517454 | Yes | 40 | >60 | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | Other HPV | NA | 574 | TRUE | 472 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_020 | GW_020 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_020 Head and neck squamous cell carcinoma | Homo sapiens | GW_020 | M | 63.8521560574949 | Yes | 30 | 1 to 30 | Primary | Oropharynx | IVC | 4a | 3 | 1 | multi | HPV16 | NA | 2240 | TRUE | 2240 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_021 | GW_021 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_021 Head and neck squamous cell carcinoma | Homo sapiens | GW_021 | M | 59.2306639288159 | Yes | 20 | 1 to 30 | Primary | Oropharynx | II | 2 | 0 | 0 | multi | HPV16 | DNA+RNA+ | 1786 | FALSE | 1786 | FALSE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_022 | GW_022 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_022 Head and neck squamous cell carcinoma | Homo sapiens | GW_022 | M | 68.4435318275154 | Yes | 50 | 1 to 30 | Primary | Oropharynx | IVA | 2 | 2a | 0 | mono | Other HPV | NA | 1822 | FALSE | 1822 | FALSE | Basal 4 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_023 | GW_023 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_023 Head and neck squamous cell carcinoma | Homo sapiens | GW_023 | F | 69.8754277891855 | Yes | 12 | no | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | HPV16 | NA | 595 | TRUE | 354 | TRUE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_025 | GW_025 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_025 Head and neck squamous cell carcinoma | Homo sapiens | GW_025 | M | 53.6892539356605 | Yes | 30 | >60 | Primary | Oropharynx | IVB | 3 | 3 | 0 | multi | HPV16 | DNA+RNA- | 1003 | FALSE | 1003 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_026 | GW_026 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_026 Head and neck squamous cell carcinoma | Homo sapiens | GW_026 | M | 51.5373032169747 | Yes | 10 | 1 to 30 | Primary | Oropharynx | III | 2 | 1 | 0 | multi | HPV16 | DNA+RNA+ | 1058 | FALSE | 1058 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_027 | GW_027 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_027 Head and neck squamous cell carcinoma | Homo sapiens | GW_027 | M | 56.7173169062286 | Yes | 40 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 2b | 0 | multi | HPV16 | DNA+RNA+ | 1149 | FALSE | 701 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_028 | GW_028 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_028 Head and neck squamous cell carcinoma | Homo sapiens | GW_028 | M | 73.9876796714579 | No | 0 | 1 to 30 | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | HPV16 | DNA+RNA+ | 1249 | FALSE | 1249 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_029 | GW_029 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_029 Head and neck squamous cell carcinoma | Homo sapiens | GW_029 | M | 63.7262149212868 | No | 0 | 1 to 30 | Primary | Cavum Oris | IVA | 4a | 2b | 0 | multi | HPV16 | DNA+RNA- | 1435 | FALSE | 1435 | FALSE | Mesenchymal 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_030 | GW_030 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_030 Head and neck squamous cell carcinoma | Homo sapiens | GW_030 | M | 66.0835044490075 | Yes | 60 | 31 to 60 | Primary | Oropharynx | III | 2 | 1 | 0 | multi | HPV16 | DNA+RNA+ | 1254 | FALSE | 1254 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_031 | GW_031 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_031 Head and neck squamous cell carcinoma | Homo sapiens | GW_031 | F | 56.5229295003422 | Yes | 2 | 1 to 30 | Primary | Oropharynx | IVA | 3 | 2c | 0 | multi | HPV16 | DNA+RNA+ | 1064 | FALSE | 1064 | FALSE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_032 | GW_032 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_032 Head and neck squamous cell carcinoma | Homo sapiens | GW_032 | M | 45.7960301163587 | No | 0 | 1 to 30 | Primary | Oropharynx | IVA | 1 | 2b | 0 | multi | HPV16 | DNA+RNA- | 1724 | TRUE | 434 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_033 | GW_033 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_033 Head and neck squamous cell carcinoma | Homo sapiens | GW_033 | M | 56.6543463381246 | Yes | 35 | >60 | Primary | Oropharynx | III | 1 | 1 | 0 | multi | HPV16 | DNA+RNA+ | 1687 | FALSE | 1343 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_034 | GW_034 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_034 Head and neck squamous cell carcinoma | Homo sapiens | GW_034 | M | 62.5188227241615 | Yes | 40 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 2b | 0 | multi | HPV16 | DNA+RNA- | 473 | TRUE | 351 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_035 | GW_035 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_035 Head and neck squamous cell carcinoma | Homo sapiens | GW_035 | M | 67.6358658453114 | No | 0 | no | Primary | Oropharynx | IVA | 4a | 2c | 0 | multi | HPV16 | DNA+RNA+ | 1214 | TRUE | 1064 | TRUE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_036 | GW_036 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_036 Head and neck squamous cell carcinoma | Homo sapiens | GW_036 | F | 64.3969883641342 | Yes | 8 | 1 to 30 | Primary | Oropharynx | IVB | 4b | 2c | 0 | multi | HPV16 | DNA+RNA+ | 793 | TRUE | 793 | TRUE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_037 | GW_037 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_037 Head and neck squamous cell carcinoma | Homo sapiens | GW_037 | M | 56.7967145790554 | Yes | 60 | 1 to 30 | Primary | Oropharynx | IVA | 1 | 2a | 0 | multi | HPV16 | NA | 968 | TRUE | 968 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_038 | GW_038 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_038 Head and neck squamous cell carcinoma | Homo sapiens | GW_038 | M | 40.2655715263518 | Yes | NA | >60 | Primary | Cavum Oris | II | 2 | 0 | 0 | multi | HPV16 | DNA+RNA- | 947 | FALSE | 947 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_039 | GW_039 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_039 Head and neck squamous cell carcinoma | Homo sapiens | GW_039 | F | 52.3258042436687 | No | 0 | 1 to 30 | Primary | Oropharynx | IVA | 1 | 2b | 0 | mono | HPV16 | NA | 933 | FALSE | 933 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_040 | GW_040 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_040 Head and neck squamous cell carcinoma | Homo sapiens | GW_040 | M | 60.0301163586585 | Yes | 40 | 31 to 60 | Primary | Oropharynx | IVA | 2 | 2c | 0 | multi | HPV16 | NA | 885 | FALSE | 221 | TRUE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_041 | GW_041 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_041 Head and neck squamous cell carcinoma | Homo sapiens | GW_041 | F | 69.7577002053388 | Yes | 7 | no | Primary | Cavum Oris | IVB | 4a | 3 | 0 | multi | HPV16 | DNA+RNA+ | 884 | FALSE | 884 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_042 | GW_042 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_042 Head and neck squamous cell carcinoma | Homo sapiens | GW_042 | M | 50.2505133470226 | Yes | 111 | >60 | Primary | Oropharynx | IVB | 4b | 2c | 0 | multi | HPV16 | DNA+RNA- | 937 | FALSE | 937 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_043 | GW_043 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_043 Head and neck squamous cell carcinoma | Homo sapiens | GW_043 | M | 52.3258042436687 | Yes | 10 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 2b | 0 | multi | Other HPV | NA | 1098 | TRUE | 118 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_044 | GW_044 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_044 Head and neck squamous cell carcinoma | Homo sapiens | GW_044 | M | 71.3045859000684 | No | 0 | 31 to 60 | Primary | Oropharynx | IVA | 4a | 2b | 0 | mono | Other HPV | NA | 1002 | TRUE | 428 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_045 | GW_045 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_045 Head and neck squamous cell carcinoma | Homo sapiens | GW_045 | F | 52.9226557152635 | Yes | 40 | >60 | Primary | Oropharynx | IVA | 4a | 2b | 0 | multi | Other HPV | NA | 1508 | FALSE | 1508 | FALSE | Mesenchymal 3 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_046 | GW_046 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_046 Head and neck squamous cell carcinoma | Homo sapiens | GW_046 | M | 58.362765229295 | Yes | 40 | >60 | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 1191 | TRUE | 1191 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_047 | GW_047 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_047 Head and neck squamous cell carcinoma | Homo sapiens | GW_047 | M | 46.5188227241615 | Yes | 35 | no | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 1137 | FALSE | 1137 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_049 | GW_049 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_049 Head and neck squamous cell carcinoma | Homo sapiens | GW_049 | M | 59.0198494182067 | Yes | 60 | 31 to 60 | Primary | Larynx | IVB | 2 | 3 | 0 | multi | Negative | DNA- | 1281 | TRUE | 1281 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_051 | GW_051 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_051 Head and neck squamous cell carcinoma | Homo sapiens | GW_051 | M | 57.7604380561259 | Yes | 50 | >60 | Primary | Oropharynx | IVA | 4a | 2c | 0 | mono | Negative | DNA- | 753 | TRUE | 443 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_052 | GW_052 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_052 Head and neck squamous cell carcinoma | Homo sapiens | GW_052 | M | 51.4579055441478 | Yes | 35 | >60 | Secondary | Hypopharynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 1052 | FALSE | 463 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_053 | GW_053 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_053 Head and neck squamous cell carcinoma | Homo sapiens | GW_053 | M | 47.6495550992471 | Yes | 12 | >60 | Primary | Oropharynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 1150 | TRUE | 322 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_054 | GW_054 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_054 Head and neck squamous cell carcinoma | Homo sapiens | GW_054 | M | 48.5585215605749 | Yes | 35 | >60 | Primary | Oropharynx | IVA | 1 | 2a | 0 | multi | Negative | DNA- | 1270 | TRUE | 1270 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_056 | GW_056 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_056 Head and neck squamous cell carcinoma | Homo sapiens | GW_056 | M | 68.6899383983573 | Yes | 45 | 1 to 30 | Primary | Cavum Oris | II | 2 | 0 | 0 | multi | Negative | DNA- | 2029 | FALSE | 2001 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_057 | GW_057 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_057 Head and neck squamous cell carcinoma | Homo sapiens | GW_057 | M | 59.7754962354552 | Yes | 48 | >60 | Primary | Oropharynx | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 267 | TRUE | 267 | TRUE | Mesenchymal 3 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_058 | GW_058 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_058 Head and neck squamous cell carcinoma | Homo sapiens | GW_058 | M | 51.0992470910335 | Yes | 30 | 1 to 30 | Primary | Oropharynx | IVA | 3 | 2c | 0 | multi | Negative | DNA- | 1219 | FALSE | 1219 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_059 | GW_059 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_059 Head and neck squamous cell carcinoma | Homo sapiens | GW_059 | M | 65.4182067077344 | Yes | 125 | 31 to 60 | Primary | Oropharynx | IVA | 4a | 0 | 0 | mono | Negative | DNA- | 1074 | FALSE | 143 | TRUE | Basal 4 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_060 | GW_060 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_060 Head and neck squamous cell carcinoma | Homo sapiens | GW_060 | F | 78.0643394934976 | Yes | 50 | >60 | Primary | Cavum Oris | II | 2 | 0 | 0 | mono | Negative | DNA- | 1179 | TRUE | 1179 | TRUE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_061 | GW_061 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_061 Head and neck squamous cell carcinoma | Homo sapiens | GW_061 | F | 70.4941820670773 | No | 0 | no | Primary | Cavum Oris | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 1066 | TRUE | 304 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_062 | GW_062 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_062 Head and neck squamous cell carcinoma | Homo sapiens | GW_062 | M | 54.0451745379877 | Yes | 30 | >60 | Primary | Oropharynx | III | 3 | 1 | 0 | multi | Negative | DNA- | 1717 | FALSE | 1717 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_063 | GW_063 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_063 Head and neck squamous cell carcinoma | Homo sapiens | GW_063 | M | 43.1895961670089 | Yes | 30 | >60 | Primary | Cavum Oris | III | 2 | 1 | 0 | multi | Negative | DNA- | 2059 | FALSE | 2059 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_064 | GW_064 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_064 Head and neck squamous cell carcinoma | Homo sapiens | GW_064 | M | 68.227241615332 | No | 0 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 2b | 0 | mono | Negative | DNA- | 177 | TRUE | 177 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_065 | GW_065 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_065 Head and neck squamous cell carcinoma | Homo sapiens | GW_065 | M | 69.2511978097194 | Yes | 40 | 31 to 60 | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 274 | TRUE | 257 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_066 | GW_066 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_066 Head and neck squamous cell carcinoma | Homo sapiens | GW_066 | M | 54.009582477755 | Yes | 35 | 31 to 60 | Primary | Cavum Oris | I | 1 | 0 | 0 | mono | Negative | DNA- | 1962 | TRUE | 1711 | TRUE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_067 | GW_067 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_067 Head and neck squamous cell carcinoma | Homo sapiens | GW_067 | M | 56.9883641341547 | Yes | 41 | >60 | Primary | Oropharynx | II | 2 | 0 | 0 | multi | Negative | DNA- | 2001 | FALSE | 2001 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_068 | GW_068 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_068 Head and neck squamous cell carcinoma | Homo sapiens | GW_068 | M | 50.8090349075975 | Yes | 30 | >60 | Primary | Oropharynx | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 1597 | FALSE | 1042 | TRUE | Basal 4 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_069 | GW_069 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_069 Head and neck squamous cell carcinoma | Homo sapiens | GW_069 | M | 49.0047912388775 | Yes | 30 | 31 to 60 | Primary | Cavum Oris | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 945 | FALSE | 945 | FALSE | Basal 4 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_070 | GW_070 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_070 Head and neck squamous cell carcinoma | Homo sapiens | GW_070 | F | 69.7987679671458 | No | 0 | no | Primary | Cavum Oris | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 974 | FALSE | 974 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_071 | GW_071 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_071 Head and neck squamous cell carcinoma | Homo sapiens | GW_071 | F | 59.0691307323751 | Yes | 33 | 1 to 30 | Primary | Oropharynx | IVA | 1 | 2b | 0 | multi | Negative | DNA- | 1002 | FALSE | 1002 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_072 | GW_072 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_072 Head and neck squamous cell carcinoma | Homo sapiens | GW_072 | F | 50.6447638603696 | Yes | 15 | >60 | Primary | Cavum Oris | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 1016 | FALSE | 1016 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_073 | GW_073 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_073 Head and neck squamous cell carcinoma | Homo sapiens | GW_073 | M | 52.829568788501 | Yes | 36 | >60 | Primary | Oropharynx | IVA | 4a | 2a | 0 | multi | Negative | DNA- | 1004 | FALSE | 1004 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_074 | GW_074 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_074 Head and neck squamous cell carcinoma | Homo sapiens | GW_074 | M | 87.4086242299795 | No | 0 | no | Primary | Cavum Oris | IVA | 4a | 2b | 0 | palliative | Negative | DNA- | 1002 | TRUE | 1002 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_075 | GW_075 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_075 Head and neck squamous cell carcinoma | Homo sapiens | GW_075 | M | 56.788501026694 | Yes | 40 | 1 to 30 | Primary | Oropharynx | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 982 | FALSE | 982 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_076 | GW_076 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_076 Head and neck squamous cell carcinoma | Homo sapiens | GW_076 | M | 56.7693360711841 | Yes | 40 | >60 | Primary | Cavum Oris | II | 2 | 0 | 0 | mono | Negative | DNA- | 961 | FALSE | 507 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_077 | GW_077 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_077 Head and neck squamous cell carcinoma | Homo sapiens | GW_077 | M | 64.5338809034908 | Yes | 75 | 31 to 60 | Primary | Cavum Oris | I | 1 | 0 | 0 | mono | Negative | DNA- | 954 | FALSE | 954 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_078 | GW_078 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_078 Head and neck squamous cell carcinoma | Homo sapiens | GW_078 | F | 52.5694729637235 | Yes | 30 | no | Primary | Cavum Oris | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 951 | TRUE | 503 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_079 | GW_079 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_079 Head and neck squamous cell carcinoma | Homo sapiens | GW_079 | M | 56.8624229979466 | Yes | 40 | >60 | Primary | Oropharynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 944 | FALSE | 517 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_080 | GW_080 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_080 Head and neck squamous cell carcinoma | Homo sapiens | GW_080 | M | 67.3292265571526 | Yes | 30 | 1 to 30 | Primary | Cavum Oris | IVA | 4a | 1 | 0 | multi | Negative | DNA- | 941 | FALSE | 941 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_081 | GW_081 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_081 Head and neck squamous cell carcinoma | Homo sapiens | GW_081 | M | 48.1752224503765 | Yes | 35 | >60 | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 906 | TRUE | 394 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_082 | GW_082 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_082 Head and neck squamous cell carcinoma | Homo sapiens | GW_082 | M | 54.1327857631759 | Yes | 30 | >60 | Primary | Cavum Oris | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 927 | FALSE | 864 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_083 | GW_083 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_083 Head and neck squamous cell carcinoma | Homo sapiens | GW_083 | M | 61.347022587269 | No | 0 | >60 | Primary | Oropharynx | IVB | 1 | 3 | 0 | multi | Negative | DNA- | 896 | FALSE | 285 | TRUE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_084 | GW_084 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_084 Head and neck squamous cell carcinoma | Homo sapiens | GW_084 | M | 40.0465434633812 | Yes | 17 | >60 | Primary | Cavum Oris | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 903 | TRUE | 279 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_085 | GW_085 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_085 Head and neck squamous cell carcinoma | Homo sapiens | GW_085 | M | 58.9267624914442 | Yes | 31 | 1 to 30 | Primary | Oropharynx | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 875 | FALSE | 875 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_086 | GW_086 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_086 Head and neck squamous cell carcinoma | Homo sapiens | GW_086 | M | 77.1170431211499 | Yes | 45 | 31 to 60 | Primary | Larynx | IVA | 4a | 2c | 0 | mono | Negative | DNA- | 906 | FALSE | 906 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_087 | GW_087 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_087 Head and neck squamous cell carcinoma | Homo sapiens | GW_087 | M | 68.3175906913073 | Yes | 48 | no | Primary | Hypopharynx | III | 3 | 1 | 0 | multi | Negative | DNA- | 1808 | TRUE | 468 | TRUE | Mesenchymal 3 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_088 | GW_088 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_088 Head and neck squamous cell carcinoma | Homo sapiens | GW_088 | M | 58.0177960301164 | Yes | 15 | no | Primary | Oropharynx | IVA | 2 | 2b | 0 | multi | HPV16 | DNA+RNA+ | 1837 | FALSE | 1837 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_089 | GW_089 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_089 Head and neck squamous cell carcinoma | Homo sapiens | GW_089 | M | 55.7070499657769 | Yes | 30 | >60 | Primary | Oropharynx | IVA | 4a | 2c | 0 | multi | NA | NA | 304 | TRUE | 287 | TRUE | Basal 4 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_091 | GW_091 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_091 Head and neck squamous cell carcinoma | Homo sapiens | GW_091 | M | 63.5099247091034 | Yes | 76 | >60 | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 652 | TRUE | 346 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_092 | GW_092 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_092 Head and neck squamous cell carcinoma | Homo sapiens | GW_092 | M | 61.223819301848 | Yes | 40 | >60 | Primary | Oropharynx | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 2033 | TRUE | 228 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_093 | GW_093 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_093 Head and neck squamous cell carcinoma | Homo sapiens | GW_093 | M | 57.1471594798084 | Yes | 60 | >60 | Primary | Oropharynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 1827 | FALSE | 1827 | FALSE | Basal 4 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_094 | GW_094 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_094 Head and neck squamous cell carcinoma | Homo sapiens | GW_094 | M | 51.192334017796 | Yes | 30 | >60 | Primary | Oropharynx | IVA | 3 | 2c | 0 | mono | Other HPV | NA | 1872 | TRUE | 136 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_095 | GW_095 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_095 Head and neck squamous cell carcinoma | Homo sapiens | GW_095 | F | 70.0971937029432 | No | 0 | no | Primary | Oropharynx | II | 2 | 0 | 0 | mono | HPV16 | DNA+RNA+ | 2025 | FALSE | 2025 | FALSE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_096 | GW_096 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_096 Head and neck squamous cell carcinoma | Homo sapiens | GW_096 | F | 55.6440793976728 | Yes | 10 | 1 to 30 | Primary | Oropharynx | III | 2 | 1 | 0 | multi | HPV16 | DNA+RNA+ | 1855 | FALSE | 1855 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_097 | GW_097 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_097 Head and neck squamous cell carcinoma | Homo sapiens | GW_097 | F | 56.3969883641342 | Yes | 28 | >60 | Primary | Oropharynx | III | 3 | 1 | 0 | multi | Negative | DNA- | 2310 | FALSE | 2310 | FALSE | Basal 4 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_101 | GW_101 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_101 Head and neck squamous cell carcinoma | Homo sapiens | GW_101 | M | 69.0951403148528 | No | 0 | no | Secondary | Larynx | II | 2 | 0 | 0 | multi | Negative | DNA- | 499 | TRUE | 499 | TRUE | Classical 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_102 | GW_102 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_102 Head and neck squamous cell carcinoma | Homo sapiens | GW_102 | M | 40.394250513347 | Yes | 7 | >60 | Primary | Hypopharynx | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 679 | TRUE | 569 | TRUE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_103 | GW_103 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_103 Head and neck squamous cell carcinoma | Homo sapiens | GW_103 | M | 77.409993155373 | No | 0 | 31 to 60 | Primary | Larynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 1099 | FALSE | 166 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_104 | GW_104 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_104 Head and neck squamous cell carcinoma | Homo sapiens | GW_104 | M | 71.668720054757 | Yes | 45 | 31 to 60 | Primary | Hypopharynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 1219 | FALSE | 1219 | FALSE | Mesenchymal 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_105 | GW_105 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_105 Head and neck squamous cell carcinoma | Homo sapiens | GW_105 | M | 52.4271047227926 | Yes | 30 | >60 | Primary | Larynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 1904 | FALSE | 1904 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_106 | GW_106 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_106 Head and neck squamous cell carcinoma | Homo sapiens | GW_106 | M | 49.2566735112936 | Yes | 45 | >60 | Primary | Hypopharynx | IVC | 4a | 2c | 1 | multi | Negative | DNA- | 23 | TRUE | 23 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_107 | GW_107 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_107 Head and neck squamous cell carcinoma | Homo sapiens | GW_107 | M | 44.4599589322382 | Yes | 30 | 31 to 60 | Primary | Oropharynx | I | 1 | 0 | 0 | multi | Negative | DNA- | 1176 | FALSE | 846 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 1 | total RNA | biotin | GPL10558 | ||
| GW_108 | GW_108 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_108 Head and neck squamous cell carcinoma | Homo sapiens | GW_108 | M | 72.6680355920602 | Yes | 25 | 1 to 30 | Primary | Larynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 1147 | FALSE | 1147 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_109 | GW_109 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_109 Head and neck squamous cell carcinoma | Homo sapiens | GW_109 | F | 70.4093086926762 | No | 0 | 1 to 30 | Primary | Cavum Oris | III | 1 | 1 | 0 | multi | Negative | DNA- | 1178 | FALSE | 1178 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_110 | GW_110 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_110 Head and neck squamous cell carcinoma | Homo sapiens | GW_110 | M | 63.2005475701574 | No | 0 | 31 to 60 | Primary | Oropharynx | IVA | 1 | 2b | 0 | multi | HPV16 | DNA+RNA+ | 1123 | FALSE | 1123 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_111 | GW_111 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_111 Head and neck squamous cell carcinoma | Homo sapiens | GW_111 | M | 67.4496919917865 | Yes | 50 | 31 to 60 | Primary | Larynx | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 1051 | FALSE | 1051 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_112 | GW_112 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_112 Head and neck squamous cell carcinoma | Homo sapiens | GW_112 | M | 74.0396988364134 | Yes | 30 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 1 | 0 | multi | Negative | DNA- | 1184 | FALSE | 1184 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_113 | GW_113 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_113 Head and neck squamous cell carcinoma | Homo sapiens | GW_113 | M | 60.0328542094456 | Yes | 16 | 1 to 30 | Primary | Larynx | IVA | 3 | 2c | 0 | multi | Negative | DNA- | 1192 | FALSE | 1192 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_115 | GW_115 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_115 Head and neck squamous cell carcinoma | Homo sapiens | GW_115 | M | 56.9144421629021 | Yes | 25 | >60 | Primary | Larynx | IVA | 3 | 2c | 0 | multi | Negative | DNA- | 1808 | FALSE | 1808 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_116 | GW_116 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_116 Head and neck squamous cell carcinoma | Homo sapiens | GW_116 | M | 69.2950034223135 | Yes | 30 | >60 | Primary | Larynx | IVA | 3 | 2c | 0 | multi | Negative | DNA- | 1332 | FALSE | 1332 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_117 | GW_117 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_117 Head and neck squamous cell carcinoma | Homo sapiens | GW_117 | M | 69.7248459958932 | Yes | 50 | 1 to 30 | Primary | Larynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 1305 | FALSE | 1305 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_118 | GW_118 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_118 Head and neck squamous cell carcinoma | Homo sapiens | GW_118 | M | 57.9082819986311 | Yes | 40 | 1 to 30 | Primary | Hypopharynx | IVA | 3 | 2c | 0 | multi | Negative | DNA- | 1024 | FALSE | 1024 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_119 | GW_119 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_119 Head and neck squamous cell carcinoma | Homo sapiens | GW_119 | M | 54.1601642710472 | Yes | 15 | >60 | Primary | Hypopharynx | III | 3 | 1 | 0 | multi | Negative | DNA- | 1060 | FALSE | 1060 | FALSE | Atypical IR 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_120 | GW_120 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_120 Head and neck squamous cell carcinoma | Homo sapiens | GW_120 | F | 68.3203285420945 | No | 0 | 1 to 30 | Primary | Hypopharynx | IVA | 4a | 1 | 0 | multi | Negative | DNA- | 602 | TRUE | 602 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_122 | GW_122 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_122 Head and neck squamous cell carcinoma | Homo sapiens | GW_122 | M | 77.284052019165 | Yes | 80 | 31 to 60 | Primary | Cavum Oris | II | 2 | 0 | 0 | multi | Negative | DNA- | 831 | TRUE | 484 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_123 | GW_123 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_123 Head and neck squamous cell carcinoma | Homo sapiens | GW_123 | M | 50.2943189596167 | Yes | 30 | 1 to 30 | Primary | Hypopharynx | III | 2 | 1 | 0 | multi | Negative | DNA- | 1067 | FALSE | 1067 | FALSE | Basal 4 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_124 | GW_124 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_124 Head and neck squamous cell carcinoma | Homo sapiens | GW_124 | M | 80.2710472279261 | Yes | 65 | 31 to 60 | Primary | Larynx | I | 1 | 0 | 0 | mono | Negative | DNA- | 118 | TRUE | 118 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_125 | GW_125 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_125 Head and neck squamous cell carcinoma | Homo sapiens | GW_125 | F | 56.5667351129363 | No | 0 | no | Primary | Larynx | IVA | 3 | 2b | 0 | multi | HPV16 | DNA+RNA- | 1107 | FALSE | 1107 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_126 | GW_126 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_126 Head and neck squamous cell carcinoma | Homo sapiens | GW_126 | M | 52.3340177960301 | Yes | 45 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 954 | FALSE | 954 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_127 | GW_127 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_127 Head and neck squamous cell carcinoma | Homo sapiens | GW_127 | M | 68.1095140314853 | Yes | 20 | 1 to 30 | Primary | Cavum Oris | III | 1 | 1 | 0 | multi | Negative | DNA- | 834 | FALSE | 834 | FALSE | Basal 4 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_128 | GW_128 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_128 Head and neck squamous cell carcinoma | Homo sapiens | GW_128 | M | 55.3483915126626 | Yes | 40 | >60 | Primary | Larynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 253 | TRUE | 253 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_129 | GW_129 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_129 Head and neck squamous cell carcinoma | Homo sapiens | GW_129 | F | 58.1957563312799 | Yes | 30 | 1 to 30 | Primary | Larynx | IVA | 4a | 2c | 0 | multi | HPV16 | DNA+RNA+ | 1252 | FALSE | 1252 | FALSE | Basal 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_130 | GW_130 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_130 Head and neck squamous cell carcinoma | Homo sapiens | GW_130 | M | 74.8117727583847 | No | 0 | 1 to 30 | Primary | Larynx | IVC | 4a | 1 | 1 | multi | Negative | DNA- | 521 | TRUE | 457 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_131 | GW_131 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_131 Head and neck squamous cell carcinoma | Homo sapiens | GW_131 | M | 51.2826830937714 | Yes | 35 | >60 | Primary | Cavum Oris | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 968 | FALSE | 968 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_133 | GW_133 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_133 Head and neck squamous cell carcinoma | Homo sapiens | GW_133 | M | 55.1238877481177 | Yes | 39 | 31 to 60 | Primary | Larynx | IVB | 3 | 3 | 0 | multi | Negative | DNA- | 429 | TRUE | 429 | TRUE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_134 | GW_134 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_134 Head and neck squamous cell carcinoma | Homo sapiens | GW_134 | M | 70.6830937713895 | Yes | 20 | 1 to 30 | Primary | Larynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 1211 | FALSE | 1211 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_135 | GW_135 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_135 Head and neck squamous cell carcinoma | Homo sapiens | GW_135 | M | 60.0684462696783 | Yes | 45 | >60 | Primary | Larynx | I | 1 | 0 | 0 | mono | Negative | DNA- | 1182 | FALSE | 67 | TRUE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_136 | GW_136 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_136 Head and neck squamous cell carcinoma | Homo sapiens | GW_136 | M | 81.7659137577002 | No | 0 | 1 to 30 | Primary | Hypopharynx | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 582 | TRUE | 561 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_137 | GW_137 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_137 Head and neck squamous cell carcinoma | Homo sapiens | GW_137 | M | 52.4052019164955 | Yes | 30 | >60 | Primary | Hypopharynx | III | 2 | 1 | 0 | multi | Negative | DNA- | 996 | FALSE | 996 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_138 | GW_138 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_138 Head and neck squamous cell carcinoma | Homo sapiens | GW_138 | M | 61.9767282683094 | Yes | 60 | >60 | Primary | Hypopharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 979 | FALSE | 979 | FALSE | Mesenchymal 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_139 | GW_139 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_139 Head and neck squamous cell carcinoma | Homo sapiens | GW_139 | M | 56.2956878850103 | Yes | 70 | >60 | Primary | Larynx | I | 1 | 0 | 0 | mono | Negative | DNA- | 1043 | FALSE | 1043 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_140 | GW_140 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_140 Head and neck squamous cell carcinoma | Homo sapiens | GW_140 | M | 58.6146475017112 | Yes | NA | 1 to 30 | Primary | Larynx | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 1270 | TRUE | 674 | TRUE | Atypical IR 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_141 | GW_141 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_141 Head and neck squamous cell carcinoma | Homo sapiens | GW_141 | M | 67.0636550308008 | No | 0 | 1 to 30 | Primary | Larynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 885 | FALSE | 885 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_142 | GW_142 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_142 Head and neck squamous cell carcinoma | Homo sapiens | GW_142 | M | 57.1334702258727 | Yes | 60 | >60 | Primary | Larynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 1185 | FALSE | 1185 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_143 | GW_143 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_143 Head and neck squamous cell carcinoma | Homo sapiens | GW_143 | M | 58.9349760438056 | Yes | 60 | >60 | Primary | Hypopharynx | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 811 | TRUE | 811 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_144 | GW_144 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_144 Head and neck squamous cell carcinoma | Homo sapiens | GW_144 | M | 65.6454483230664 | Yes | 45 | 31 to 60 | Primary | Larynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 1024 | FALSE | 1024 | FALSE | Mesenchymal 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_145 | GW_145 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_145 Head and neck squamous cell carcinoma | Homo sapiens | GW_145 | M | 44.7227926078029 | Yes | 50 | >60 | Primary | Larynx | IVA | 3 | 2b | 0 | mono | Negative | DNA- | 856 | FALSE | 733 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_146 | GW_146 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_146 Head and neck squamous cell carcinoma | Homo sapiens | GW_146 | M | 51.6495550992471 | Yes | 33 | >60 | Primary | Cavum Oris | I | 1 | 0 | 0 | mono | Negative | DNA- | 1017 | FALSE | 1017 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_147 | GW_147 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_147 Head and neck squamous cell carcinoma | Homo sapiens | GW_147 | F | 72.5201916495551 | No | 0 | 1 to 30 | Primary | Oropharynx | IVA | 3 | 2c | 0 | multi | HPV16 | DNA+RNA- | 489 | TRUE | 489 | TRUE | Atypical IR 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_148 | GW_148 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_148 Head and neck squamous cell carcinoma | Homo sapiens | GW_148 | M | 64.4161533196441 | Yes | 50 | 1 to 30 | Primary | Cavum Oris | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 1057 | FALSE | 468 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_149 | GW_149 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_149 Head and neck squamous cell carcinoma | Homo sapiens | GW_149 | M | 55.9534565366188 | Yes | 40 | 1 to 30 | Primary | Oropharynx | IVA | 4a | 2c | 0 | mono | Other HPV | NA | 1057 | TRUE | 188 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_150 | GW_150 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_150 Head and neck squamous cell carcinoma | Homo sapiens | GW_150 | M | 70.7132101300479 | Yes | 55 | >60 | Primary | Cavum Oris | II | 2 | 0 | 0 | multi | Negative | DNA- | 1009 | TRUE | 1009 | TRUE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_151 | GW_151 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_151 Head and neck squamous cell carcinoma | Homo sapiens | GW_151 | M | 53.8945927446954 | Yes | 40 | >60 | Primary | Cavum Oris | III | 3 | 0 | 0 | mono | HPV16 | DNA+RNA- | 1107 | FALSE | 1008 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_152 | GW_152 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_152 Head and neck squamous cell carcinoma | Homo sapiens | GW_152 | M | 48.8268309377139 | Yes | 45 | >60 | Primary | Cavum Oris | II | 2 | 0 | 0 | mono | HPV16 | DNA+RNA+ | 875 | FALSE | 875 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_153 | GW_153 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_153 Head and neck squamous cell carcinoma | Homo sapiens | GW_153 | M | 42.7898699520876 | No | 0 | 1 to 30 | Primary | Cavum Oris | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 689 | TRUE | 622 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_154 | GW_154 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_154 Head and neck squamous cell carcinoma | Homo sapiens | GW_154 | M | 56.9637234770705 | No | 0 | >60 | Primary | Cavum Oris | IVC | 4a | 2a | 1 | mono | Negative | DNA- | 275 | TRUE | 275 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_155 | GW_155 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_155 Head and neck squamous cell carcinoma | Homo sapiens | GW_155 | M | 44.6269678302532 | Yes | 25 | >60 | Primary | Hypopharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 631 | TRUE | 531 | TRUE | Mesenchymal 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_156 | GW_156 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_156 Head and neck squamous cell carcinoma | Homo sapiens | GW_156 | M | 66.4531143052704 | Yes | 10 | 31 to 60 | Primary | Cavum Oris | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 1365 | FALSE | 1365 | FALSE | Basal 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_157 | GW_157 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_157 Head and neck squamous cell carcinoma | Homo sapiens | GW_157 | M | 56.9472963723477 | Yes | 40 | 31 to 60 | Primary | Hypopharynx | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 815 | FALSE | 815 | FALSE | Atypical IR 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_158 | GW_158 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_158 Head and neck squamous cell carcinoma | Homo sapiens | GW_158 | M | 68.331279945243 | Yes | 50 | 31 to 60 | Primary | Cavum Oris | I | 1 | 0 | 0 | mono | Negative | DNA- | 793 | FALSE | 793 | FALSE | Mesenchymal 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_159 | GW_159 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_159 Head and neck squamous cell carcinoma | Homo sapiens | GW_159 | M | 77.6919917864476 | No | 0 | 31 to 60 | Primary | Hypopharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 356 | TRUE | 356 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_160 | GW_160 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_160 Head and neck squamous cell carcinoma | Homo sapiens | GW_160 | M | 64.5092402464066 | Yes | 60 | no | Primary | Larynx | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 794 | FALSE | 794 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_163 | GW_163 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_163 Head and neck squamous cell carcinoma | Homo sapiens | GW_163 | F | 44.3066392881588 | Yes | 10 | 1 to 30 | Primary | Cavum Oris | I | 1 | 0 | 0 | multi | Negative | DNA- | 793 | FALSE | 309 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_164 | GW_164 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_164 Head and neck squamous cell carcinoma | Homo sapiens | GW_164 | M | 70.9815195071869 | Yes | 48 | 31 to 60 | Primary | Larynx | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 272 | TRUE | 272 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_165 | GW_165 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_165 Head and neck squamous cell carcinoma | Homo sapiens | GW_165 | M | 55.854893908282 | Yes | 30 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 1025 | FALSE | 1025 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_166 | GW_166 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_166 Head and neck squamous cell carcinoma | Homo sapiens | GW_166 | M | 52.621492128679 | Yes | 35 | >60 | Primary | Oropharynx | III | 1 | 1 | 0 | mono | HPV16 | DNA+RNA- | 734 | FALSE | 434 | TRUE | Atypical IR 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_167 | GW_167 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_167 Head and neck squamous cell carcinoma | Homo sapiens | GW_167 | M | 72.1122518822724 | Yes | 15 | 1 to 30 | Primary | Oropharynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 846 | FALSE | 846 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_168 | GW_168 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_168 Head and neck squamous cell carcinoma | Homo sapiens | GW_168 | M | 83.482546201232 | No | 0 | no | Primary | Larynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 713 | FALSE | 713 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_169 | GW_169 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_169 Head and neck squamous cell carcinoma | Homo sapiens | GW_169 | M | 77.0458590006845 | Yes | 60 | 1 to 30 | Primary | Hypopharynx | III | 2 | 1 | 0 | mono | Negative | DNA- | 1245 | FALSE | 1245 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_170 | GW_170 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_170 Head and neck squamous cell carcinoma | Homo sapiens | GW_170 | M | 54.3956194387406 | Yes | 35 | 1 to 30 | Primary | Oropharynx | IVA | 4a | 0 | 0 | mono | HPV16 | DNA+RNA+ | 725 | TRUE | 426 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_171 | GW_171 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_171 Head and neck squamous cell carcinoma | Homo sapiens | GW_171 | F | 52.6817248459959 | Yes | 3 | 1 to 30 | Primary | Larynx | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 755 | FALSE | 755 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_172 | GW_172 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_172 Head and neck squamous cell carcinoma | Homo sapiens | GW_172 | M | 45.7604380561259 | Yes | 33 | 31 to 60 | Primary | Cavum Oris | I | 1 | 0 | 0 | mono | Negative | DNA- | 758 | FALSE | 196 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_173 | GW_173 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_173 Head and neck squamous cell carcinoma | Homo sapiens | GW_173 | M | 72.7419575633128 | Yes | 45 | 31 to 60 | Primary | Larynx | III | 3 | 0 | 0 | multi | Negative | DNA- | 417 | TRUE | 353 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_174 | GW_174 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_174 Head and neck squamous cell carcinoma | Homo sapiens | GW_174 | F | 50.2642026009582 | No | 0 | no | Primary | NA | III | 3 | 1 | 0 | multi | Negative | DNA- | 1291 | FALSE | 1291 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_175 | GW_175 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_175 Head and neck squamous cell carcinoma | Homo sapiens | GW_175 | M | 73.0321697467488 | Yes | 20 | 1 to 30 | Primary | Hypopharynx | IVA | 4a | 1 | 0 | mono | Negative | DNA- | 269 | TRUE | 269 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_177 | GW_177 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_177 Head and neck squamous cell carcinoma | Homo sapiens | GW_177 | M | 61.6454483230664 | Yes | 40 | 1 to 30 | Primary | Larynx | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 730 | FALSE | 730 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_178 | GW_178 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_178 Head and neck squamous cell carcinoma | Homo sapiens | GW_178 | M | 62.7597535934292 | Yes | 55 | 31 to 60 | Primary | Hypopharynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 882 | FALSE | 882 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_179 | GW_179 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_179 Head and neck squamous cell carcinoma | Homo sapiens | GW_179 | M | 59.170431211499 | Yes | 25 | 1 to 30 | Primary | Hypopharynx | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 764 | FALSE | 764 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_180 | GW_180 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_180 Head and neck squamous cell carcinoma | Homo sapiens | GW_180 | M | 56.5749486652977 | Yes | 50 | >60 | Primary | Oropharynx | IVA | 2 | 2a | 0 | multi | Negative | DNA- | 1059 | FALSE | 700 | TRUE | Basal 4 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | total RNA | biotin | GPL10558 | ||
| GW_181 | GW_181 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_181 Head and neck squamous cell carcinoma | Homo sapiens | GW_181 | M | 61.8535249828884 | Yes | 112.5 | >60 | Primary | Cavum Oris | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 743 | FALSE | 743 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_182 | GW_182 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_182 Head and neck squamous cell carcinoma | Homo sapiens | GW_182 | M | 57.0759753593429 | Yes | 41 | >60 | Primary | Cavum Oris | IVA | 3 | 2c | 0 | multi | Negative | DNA- | 257 | TRUE | 257 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_183 | GW_183 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_183 Head and neck squamous cell carcinoma | Homo sapiens | GW_183 | M | 77.7987679671458 | Yes | 20 | >60 | Primary | Larynx | I | 1 | 0 | 0 | mono | Negative | DNA- | 617 | TRUE | 609 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_184 | GW_184 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_184 Head and neck squamous cell carcinoma | Homo sapiens | GW_184 | M | 55.7590691307324 | Yes | 25 | >60 | Primary | Larynx | IVA | 2 | 2b | 0 | multi | Negative | DNA- | 120 | TRUE | 120 | TRUE | Mesenchymal 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_185 | GW_185 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_185 Head and neck squamous cell carcinoma | Homo sapiens | GW_185 | M | 57.678302532512 | Yes | 50 | 31 to 60 | Primary | Larynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 1162 | FALSE | 1162 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_186 | GW_186 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_186 Head and neck squamous cell carcinoma | Homo sapiens | GW_186 | M | 69.7987679671458 | Yes | 38 | 31 to 60 | Primary | Larynx | IVA | 4a | 0 | 0 | mono | Negative | DNA- | 758 | FALSE | 758 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_187 | GW_187 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_187 Head and neck squamous cell carcinoma | Homo sapiens | GW_187 | M | 45.3497604380561 | No | 0 | 31 to 60 | Primary | Cavum Oris | II | 2 | 0 | 0 | mono | Negative | DNA- | 765 | FALSE | 765 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_188 | GW_188 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_188 Head and neck squamous cell carcinoma | Homo sapiens | GW_188 | M | 50.1601642710472 | Yes | 35 | 1 to 30 | Primary | Larynx | IVA | 3 | 2c | 0 | mono | Negative | DNA- | 146 | TRUE | 146 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_189 | GW_189 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_189 Head and neck squamous cell carcinoma | Homo sapiens | GW_189 | M | 59.62765229295 | Yes | 40 | 31 to 60 | Primary | Hypopharynx | IVB | 4a | 3 | 0 | multi | Negative | DNA- | 209 | TRUE | 209 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_190 | GW_190 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_190 Head and neck squamous cell carcinoma | Homo sapiens | GW_190 | M | 74.6967830253251 | No | 0 | >60 | Primary | Larynx | IVA | 3 | 2b | 0 | multi | Negative | DNA- | 769 | FALSE | 769 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_191 | GW_191 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_191 Head and neck squamous cell carcinoma | Homo sapiens | GW_191 | M | 52.1286789869952 | Yes | 42 | >60 | Primary | Larynx | I | 1 | 0 | 0 | mono | HPV16 | DNA+RNA- | 785 | FALSE | 785 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_192 | GW_192 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_192 Head and neck squamous cell carcinoma | Homo sapiens | GW_192 | M | 42.6776180698152 | Yes | 35 | >60 | Primary | Hypopharynx | III | 2 | 1 | 0 | multi | Negative | DNA- | 843 | FALSE | 843 | FALSE | Classical 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_193 | GW_193 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_193 Head and neck squamous cell carcinoma | Homo sapiens | GW_193 | M | 76.5503080082135 | Yes | 50 | 1 to 30 | Primary | Larynx | IVA | 4a | 0 | 0 | multi | Negative | DNA- | 826 | FALSE | 826 | FALSE | Basal 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_196 | GW_196 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_196 Head and neck squamous cell carcinoma | Homo sapiens | GW_196 | M | 57.4592744695414 | Yes | 45 | >60 | Primary | Hypopharynx | IVB | 2 | 3 | 0 | multi | Negative | DNA- | 258 | TRUE | 258 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_197 | GW_197 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_197 Head and neck squamous cell carcinoma | Homo sapiens | GW_197 | M | 48.2956878850103 | Yes | 20 | 1 to 30 | Primary | Cavum Oris | IVA | 4a | 0 | 0 | mono | Negative | DNA- | 139 | TRUE | 115 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_198 | GW_198 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_198 Head and neck squamous cell carcinoma | Homo sapiens | GW_198 | M | 46.9267624914442 | Yes | 15 | >60 | Primary | Cavum Oris | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 710 | FALSE | 710 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_199 | GW_199 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_199 Head and neck squamous cell carcinoma | Homo sapiens | GW_199 | M | 50.6639288158795 | Yes | 35 | 31 to 60 | Primary | Hypopharynx | IVA | 4a | 2b | 0 | multi | Negative | DNA- | 769 | FALSE | 769 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_200 | GW_200 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_200 Head and neck squamous cell carcinoma | Homo sapiens | GW_200 | F | 70.9979466119097 | Yes | 9 | 1 to 30 | Primary | Cavum Oris | IVC | 2 | 2c | 1 | multi | Negative | DNA- | 305 | TRUE | 92 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_201 | GW_201 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_201 Head and neck squamous cell carcinoma | Homo sapiens | GW_201 | M | 52.0520191649555 | Yes | 35 | >60 | Primary | Oropharynx | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 871 | FALSE | 871 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_202 | GW_202 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_202 Head and neck squamous cell carcinoma | Homo sapiens | GW_202 | M | 76.3504449007529 | Yes | 50 | 31 to 60 | Primary | Cavum Oris | IVA | 4a | 2c | 0 | mono | Negative | DNA- | 466 | TRUE | 283 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_203 | GW_203 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_203 Head and neck squamous cell carcinoma | Homo sapiens | GW_203 | M | 61.1060917180014 | Yes | 90 | 31 to 60 | Primary | Oropharynx | IVA | 1 | 2c | 0 | multi | HPV16 | DNA+RNA- | 855 | FALSE | 855 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Non-disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_204 | GW_204 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_204 Head and neck squamous cell carcinoma | Homo sapiens | GW_204 | M | 47.1594798083504 | No | 0 | >60 | Primary | Cavum Oris | IVA | 4a | 1 | 0 | multi | Negative | DNA- | 857 | FALSE | 857 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_205 | GW_205 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_205 Head and neck squamous cell carcinoma | Homo sapiens | GW_205 | M | 58.2833675564682 | No | 0 | no | Primary | Cavum Oris | IVA | 4a | 2c | 0 | multi | HPV16 | DNA+RNA+ | 840 | FALSE | 840 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_206 | GW_206 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_206 Head and neck squamous cell carcinoma | Homo sapiens | GW_206 | M | 53.6536618754278 | Yes | 60 | 1 to 30 | Primary | Cavum Oris | IVA | 4a | 2c | 0 | multi | Negative | DNA- | 147 | TRUE | 147 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_207 | GW_207 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_207 Head and neck squamous cell carcinoma | Homo sapiens | GW_207 | M | 51.8850102669405 | Yes | 15 | 1 to 30 | Primary | Cavum Oris | IVB | 4b | 3 | 0 | mono | Negative | DNA- | 182 | TRUE | 124 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_209 | GW_209 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_209 Head and neck squamous cell carcinoma | Homo sapiens | GW_209 | M | 48.8980150581793 | Yes | 30 | >60 | Primary | Cavum Oris | IVA | 3 | 2c | 0 | multi | Negative | DNA- | 825 | FALSE | 825 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_210 | GW_210 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_210 Head and neck squamous cell carcinoma | Homo sapiens | GW_210 | M | 56.3613963039014 | Yes | 20 | >60 | Primary | Oropharynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 790 | FALSE | 601 | TRUE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Disruptive | 0 | total RNA | biotin | GPL10558 | ||
| GW_211 | GW_211 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_211 Head and neck squamous cell carcinoma | Homo sapiens | GW_211 | F | 53.9110198494182 | Yes | 10 | 1 to 30 | Primary | Oropharynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 877 | FALSE | 539 | TRUE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_212 | GW_212 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_212 Head and neck squamous cell carcinoma | Homo sapiens | GW_212 | M | 75.709787816564 | Yes | 120 | 31 to 60 | Primary | Oropharynx | IVA | 2 | 2b | 0 | multi | HPV16 | DNA+RNA+ | 813 | FALSE | 568 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_214 | GW_214 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_214 Head and neck squamous cell carcinoma | Homo sapiens | GW_214 | M | 58.6803559206023 | Yes | 60 | >60 | Primary | Oropharynx | IVA | 3 | 2c | 0 | multi | HPV16 | DNA+RNA+ | 268 | TRUE | 239 | TRUE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_215 | GW_215 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_215 Head and neck squamous cell carcinoma | Homo sapiens | GW_215 | M | 48.8158795345654 | Yes | 24 | 31 to 60 | Primary | Oropharynx | IVA | 2 | 2b | 0 | multi | HPV16 | DNA+RNA+ | 785 | FALSE | 785 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_216 | GW_216 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_216 Head and neck squamous cell carcinoma | Homo sapiens | GW_216 | M | 56.3394934976044 | Yes | 13 | 1 to 30 | Primary | Oropharynx | IVA | 2 | 2c | 0 | mono | Other HPV | NA | 777 | FALSE | 777 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_217 | GW_217 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_217 Head and neck squamous cell carcinoma | Homo sapiens | GW_217 | M | 62.1409993155373 | No | 0 | 1 to 30 | Primary | Oropharynx | IVA | 3 | 2b | 0 | multi | HPV16 | DNA+RNA+ | 778 | FALSE | 778 | FALSE | Atypical IR 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_218 | GW_218 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_218 Head and neck squamous cell carcinoma | Homo sapiens | GW_218 | F | 75.3839835728953 | No | 0 | 1 to 30 | Primary | Cavum Oris | I | 1 | 0 | 0 | mono | HPV16 | DNA+RNA- | 787 | FALSE | 787 | FALSE | Mesenchymal 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 | ||
| GW_219 | GW_219 Head and neck squamous cell carcinoma Illumina HT12v4 | GW_219 Head and neck squamous cell carcinoma | Homo sapiens | GW_219 | M | 48.2984257357974 | Yes | 20 | no | Primary | Oropharynx | II | 2 | 0 | 0 | mono | Negative | DNA- | 750 | FALSE | 750 | FALSE | Basal 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | WT | 0 | total RNA | biotin | GPL10558 |
